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Base of the evolutionary tree for Intramacronucleata

Intramacronucleata (8859 species)
- unnamed group 84932 → (8850 species)
  - Conthreep → (4733 species)
    - Oligohymenophorea → (2921 species)
      - unnamed group 91711 → (2071 species)
      - unnamed group 91070 → (642 species)
      - Apostomatia → (46 species)
      - Astomatia → (161 species)
      - cluster HP641760
    - Phyllopharyngea → (841 species)
      - Suctoria → (456 species)
      - Rhynchodia → (69 species)
      - Cyrtophoria → (244 species)
      - Chonotrichia → (56 species)
      - Cyrtophorida → (16 species)
    - Plagiopylea → (90 species)
      - Odontostomatida → (49 species)
      - Plagiopylida → (41 species)
    - prostomes (Prostomatea) → (378 species)
      - Prorodontida → (344 species)
      - Prostomatida → (30 species)
      - Cryptocaryon → (4 species)
    - Colpodea → (269 species)
      - unnamed group 89388 → (165 species)
      - Bursariomorphida → (78 species)
      - Kreyella → (2 species)
      - Platyophryida → (22 species)
      - Rhyposophrya aplanata
      - Orthokreyella schiffmanni
    - Nassophorea → (234 species)
      - Nassulida → (121 species)
      - Synhymeniida → (54 species)
      - Colpodidium → (6 species)
      - Microthoracida → (52 species)
      - uncultured Microthoracida
  - unnamed group 84933 → (4117 species)
    - Spirotrichea → (2515 species)
      - unnamed group 87403 → (1647 species)
      - Lamtostyla → (14 species)
      - Afrokahliella → (3 species)
      - Afroamphisiella → (2 species)
      - steinia lichen (Steinia) → (3 species)
      - Eschaneustyla → (3 species)
      - Biholosticha → (2 species)
      - Euplotia → (225 species)
      - Hemiamphisiella → (5 species)
      - Licnophoria → (13 species)
      - Chaetospira → (13 species)
      - Marginotricha → (3 species)
      - Strongylidium → (21 species)
      - Neobakuella → (2 species)
      - Bakuella → (12 species)
      - Meseres → (3 species)
      - Holostichides → (6 species)
      - Australothrix → (8 species)
      - unnamed group 86999 → (40 species)
      - Neogeneia → (2 species)
      - Paragonostomum → (6 species)
      - Parabirojimia → (2 species)
      - Uroleptoides → (7 species)
      - Tetmemena → (2 species)
      - Stylonethes → (2 species)
      - Halteria → (20 species)
      - Paraholosticha → (8 species)
      - Urostrongylum → (3 species)
      - Parabistichella → (2 species)
      - Psilotrichidae → (3 species)
      - Spiroamphisiella → (2 species)
      - Tunicothrix → (3 species)
      - Paruroleptus → (9 species)
      - Birojimia → (3 species)
      - Faureia → (4 species)
      - Schmidingerotrichidae → (3 species)
      - Caudiholosticha → (12 species)
      - Afrothrix → (2 species)
      - Urospinula → (3 species)
      - Psilotricha → (5 species)
      - Hemiurosoma → (4 species)
      - Trachelochaeta → (2 species)
      - Paramphisiella → (2 species)
      - Trichototaxis → (8 species)
      - Circinella → (3 species)
      - Keronidae → (15 species)
      - Wallackia → (3 species)
      - Deviata → (9 species)
      - Gonostomum → (21 species)
      - Balladyna → (5 species)
      - Protohypotrichia → (5 species)
      - Parastrongylidium → (4 species)
      - Euplotopsis → (13 species)
      - Lamtostylides → (5 species)
      - Spirotrachelostyla → (3 species)
      - Neowallackia → (3 species)
      - Rigidothrix → (2 species)
      - Epiclintes → (3 species)
      - Cladotricha → (7 species)
      - Pseudoamphisiella → (5 species)
      - Hemisincirra → (10 species)
      - Periholosticha → (4 species)
      - Hypotrichidium → (8 species)
      - Vermioxytricha → (2 species)
      - Bistichella → (7 species)
      - unnamed group 86716 → (5 species)
      - Parakahliella → (3 species)
      - Neokeronopsis → (3 species)
      - Pseudouroleptus → (5 species)
      - Stichotricha → (27 species)
      - Amphisiella → (12 species)
      - Histriculus → (9 species)
      - Apourosomoida → (5 species)
      - Paragastrostyla → (2 species)
      - Uroleptus → (32 species)
      - Metabakuella → (2 species)
      - Trachelostyla → (6 species)
      - Engelmanniella → (2 species)
      - Perisincirra → (4 species)
      - Uronychia → (13 species)
      - Plagiotoma → (12 species)
      - Protogastrostyla → (2 species)
      - Euplotoides → (6 species)
      - Onychodromus → (3 species)
      - Terricirra → (3 species)
      - Pelagohalteria → (3 species)
      - Onychodromopsis → (3 species)
      - Ploesconia → (15 species)
      - Diophryopsis histrix
      - Fragmocirrus espeletiae
      - Hemigastrostyla enigmatica
      - Parasterkiella thompsoni
      - uncultured Oxytricha-like ciliate
      - Euplotaspis cionaecola
      - Apogastrostyla rigescens
      - Bicoronella costaricana
      - Notocephalus parvulus
      - Musajevella minima
      - Tetrakeronopsis silvanetoi
      - Parentocirrus hortualis
      - Orthamphisiella breviseries
      - Kahliela leptocirra
      - Tricoronella pulchra
      - Pattersoniella vitiphila
      - Mucotrichidium hospes
      - Cytharoides balechi
      - Balladynopsis sphaericus
      - Tetrastyla oblonga
      - Kahliella acrobates
      - Kahliella matisi
      - Kahliella simplex
      - Caudiurostyla sinensis
      - Stichoticha secunda
      - Paraeuplotes tortugensis
      - Antiokeronopsis flava
      - Keronella gracilis
      - Swedmarkia arenicola
      - Cossothigma dubium
      - Caudiamphisiella antarctica
      - Apoholosticha sinica
      - Pelagotrichidium faurei
      - Spirofilopsis tubicolanatans
      - Orthoamphisiella grelli
      - Orthoamphisiella breviseries
      - Orthoamphisiella stramenticola
      - Kahlia costata
      - Pseudourostyla subtropica
      - Pseudourostyla muscorum
      - Pseudourostyla levis
      - Pseudourostyla magna
      - Pseudourostyla cristatoides
      - Pseudourostyla nova
      - Pseudourostyla pelotensis
      - Pseudourostyla urostyla
      - Pseudourostyla guizhouensis
      - Pseudourostyla raikovi
      - Uncinata gigantea
      - Anatoliocirrus capari
      - Lacazea ovalis
      - Erniella filiformis
      - Pseudokahliella marina
      - Halterioforma caudata
      - Atractos contortus
      - Paragonostomoides xianicum
      - Balladinopsis nuda
    - Litostomatea → (1322 species)
      - Haptoria → (975 species)
      - Trichostomatia → (318 species)
      - Mesodiniidae → (29 species)
    - Armophorea → (280 species)
      - Clevelandellida → (155 species)
      - Brachonella → (11 species)
      - Tropidoatractidae → (5 species)
      - Bothrostoma → (4 species)
      - Apometopidae → (7 species)
      - Armophorida → (94 species)
      - uncultured Brachonella-like ciliate
      - Parametopus circumlabens
      - Cariaco Basin group 2
      - Cariaco Basin group 1
- Intramacronucleata inf. → (9 species)

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